Characterizing the enzyme-product complexes of thymine DNA glycosylase using crystallography and NMR
Malik, S.S., Varney, K.M., Pozharski, E., Drohat, A.C.(2015) Nucleic Acids Res 
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2015) Nucleic Acids Res 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
G/T mismatch-specific thymine DNA glycosylase | 204 | Homo sapiens | Mutation(s): 0  Gene Names: TDG EC: 3.2.2.29 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q13569 (Homo sapiens) Explore Q13569  Go to UniProtKB:  Q13569 | |||||
PHAROS:  Q13569 GTEx:  ENSG00000139372  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q13569 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (28-MER) | B [auth C] | 28 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (28-MER) | C [auth D] | 28 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ACY Query on ACY | D [auth A] | ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 97.887 | α = 90 |
b = 53.804 | β = 96.07 |
c = 81.245 | γ = 90 |
Software Name | Purpose |
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BUSTER | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM051074 |