5CQ9

Crystal structure of SopD2, a type III secreted virulence effector from Salmonella enterica


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.309
  • R-Value Work: 0.235

Literature

Macromolecules
Sequence Display for 5CQ9

Classification: CELL INVASION

Total Structure Weight: 77572.39

Macromolecule Entities
Molecule Chains Length Organism Details
Secreted effector protein sopD2 A, B 319 Salmonella enterica Gene Name(s): sopD2 STM0972
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
11-mer peptide C, D 11 Salmonella enterica

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
UNK
Query on UNK
C, D L-PEPTIDE LINKING C4 H9 N O2 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.309
  • R-Value Work: 0.235
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 70.61 α = 90.00
b = 89.80 β = 117.15
c = 75.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-07-21
  • Released Date: 2015-09-09
  • Deposition author(s): Shi, R., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

Revision History

  • 2015-09-16
    Type: Citation | Details: Citation