5BWK

6.0 A Crystal structure of a Get3-Get4-Get5 intermediate complex from S.cerevisiae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 6.0 Å
  • R-Value Free: 0.303
  • R-Value Work: 0.274

Literature

Macromolecules
Sequence Display for 5BWK

Classification: Hydrolase / Transport

Total Structure Weight: 681286.94

Macromolecule Entities
Molecule Chains Length Organism Details
ATPase GET3 A, B, C..., D, M, N, O, PA, B, C, D, M, N, O, P 373 Saccharomyces cerevisiae EC#: 3.6 IUBMB
Gene Name(s): GET3 ARR4 YDL100C D2371
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Golgi to ER traffic protein 4 E, G, I..., K, Q, S, U, WE, G, I, K, Q, S, U, W 319 Saccharomyces cerevisiae Fragment: UNP residues 11-311
Mutation: K258A, K260A
Gene Name(s): GET4 Gene View YOR164C O3580
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Ubiquitin-like protein MDY2 F, H, J..., L, R, T, V, XF, H, J, L, R, T, V, X 56 Saccharomyces cerevisiae Fragment: UNP residues 1-56
Gene Name(s): MDY2 GET5 TMA24 YOL111C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, D, M, O ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 6.0 Å
  • R-Value Free: 0.303
  • R-Value Work: 0.274
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 152.43 α = 90.00
b = 127.33 β = 110.23
c = 210.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-06-08
  • Released Date: 2015-10-14
  • Deposition author(s): Gristick, H.B., Chartron, J.W., Clemons, W.M.

Revision History

  • 2015-10-21
    Type: Database references
  • 2015-12-30
    Type: Database references