Download MendeleyCrystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Trichoderma reesei
Stogios, P.J., Xu, X., Cui, H., Savchenko, A.To be published.
4XV0
Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Trichoderma reesei
- PDB DOI: https://doi.org/10.2210/pdb4XV0/pdb
- Classification: HYDROLASE
- Organism(s): Trichoderma reesei QM6a
- Expression System: Aspergillus niger
- Mutation(s): No
- Deposited: 2015-01-26 Released: 2015-02-11
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.97 Å
- R-Value Free: 0.185
- R-Value Work: 0.122
- R-Value Observed: 0.125
wwPDB Validation 3D Report Full Report
This is version 2.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Beta-xylanase | 302 | Trichoderma reesei QM6a | Mutation(s): 0 Gene Names: TRIREDRAFT_120229 EC: 3.2.1.8 |  | |
UniProt | |||||
Find proteins for G0RA32 (Hypocrea jecorina (strain QM6a)) Explore G0RA32 Go to UniProtKB: G0RA32 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | G0RA32 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | B [auth A], C [auth A], D [auth A], E [auth A], F [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | K [auth A], L [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| CL Query on CL | G [auth A], H [auth A], I [auth A], J [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| PCA Query on PCA | A | L-PEPTIDE LINKING | C5 H7 N O3 |  | GLN |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.97 Å
- R-Value Free: 0.185
- R-Value Work: 0.122
- R-Value Observed: 0.125
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 41.708 | α = 90 |
| b = 47.49 | β = 90 |
| c = 136.403 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2015-02-11 Deposition Author(s): Stogios, P.J., Xu, X., Cui, H., Savchenko, A.
Revision History (Full details and data files)
- Version 1.0: 2015-02-11
Type: Initial release - Version 2.0: 2023-09-27
Changes: Data collection, Database references, Derived calculations, Polymer sequence, Refinement description, Source and taxonomy
