4XFX

Structure of the native full-length HIV-1 capsid protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.43 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 4XFX

Classification: VIRAL PROTEIN

Total Structure Weight: 26589.66

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 capsid protein A 231 Human immunodeficiency virus 1 Gene Name(s): gag
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IOD
Query on IOD

A IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.43 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.221
  • Space Group: P 6

Unit Cell:

Length (Å) Angle (°)
a = 92.33 α = 90.00
b = 92.33 β = 90.00
c = 57.34 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-12-29
  • Released Date: 2015-06-10
  • Deposition author(s): Gres, A.T., Kirby, K.A., Sarafianos, S.G.

Revision History

  • Version 1_0: 2015-06-10

    Type: Initial release

  • Version 1_1: 2015-06-17

    Type: Database references, Refinement description, Structure summary

  • Version 1_2: 2015-07-15

    Type: Database references

  • Version 1_3: 2017-09-20

    Type: Author supporting evidence, Database references, Derived calculations, Source and taxonomy