4W6Z

YEAST ALCOHOL DEHYDROGENASE I, SACCHAROMYCES CEREVISIAE FERMENTATIVE ENZYME


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.177

Literature

Macromolecules
Sequence Display for 4W6Z

Classification: OXIDOREDUCTASE

Total Structure Weight: 149543.72

Macromolecule Entities
Molecule Chains Length Organism Details
Alcohol dehydrogenase 1 A, B, C, D 347 Saccharomyces cerevisiae EC#: 1.1.1.1 IUBMB
Gene Name(s): ADH1 ADC1 YOL086C O0947
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
8ID
Query on 8ID

A, C NICOTINAMIDE-8-IODO-ADENINE-DINUCLEOTIDE
3R, (Synonym)
C21 H27 I N7 O14 P2
UVGUXLRSEVQZMG-NAJQWHGHSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ETF
Query on ETF

A, B, C, D TRIFLUOROETHANOL
C2 H3 F3 O
RHQDFWAXVIIEBN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
8ID N/A in BindingDB
Kd: 920000 nM  BindingMOAD
N/A in PDBbind
ETF N/A in BindingDB
Ki: 2800000 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.177
  • Space Group: P 3 2 1

Unit Cell:

Length (Å) Angle (°)
a = 144.34 α = 90.00
b = 144.34 β = 90.00
c = 128.20 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-08-21
  • Released Date: 2014-09-03
  • Deposition author(s): plapp, B.v., savarimuthu, b.r., ramaswamy, s.
  • Previous versions: 2HCY

Revision History

  • Version 1_0: 2014-09-03

    Type: Initial release

  • Version 1_1: 2014-10-01

    Type: Database references

  • Version 1_2: 2017-09-20

    Type: Author supporting evidence, Data collection, Database references, Derived calculations, Other, Source and taxonomy