4PED

Mitochondrial ADCK3 employs an atypical protein kinase-like fold to enable coenzyme Q biosynthes


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.64 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.165

Literature

Macromolecules
Sequence Display for 4PED

Classification: TRANSFERASE

Total Structure Weight: 46143.50

Macromolecule Entities
Molecule Chains Length Organism Details
Chaperone activity of bc1 complex-like, mitochondrial A 393 Homo sapiens Fragment: UNP residues 204-595
Gene Name(s): ADCK3 CABC1 PP265
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.64 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.165
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 148.67 α = 90.00
b = 54.56 β = 94.00
c = 45.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-04-22
  • Released Date: 2014-11-19
  • Deposition author(s): Bingman, C.A., Smith, R., Joshi, S., Stefely, J.A., Reidenbach, A.G., Ulbrich, A., Oruganty, O., Floyd, B.J., Jochem, A., Saunders, J.M., Johnson, I.E., Wrobel, R.L., Barber, G.E., Lee, D., Li, S., Kannan, N., Coon, J.J., Pagliarini, D.J., Mitochondrial Protein Partnership (MPP)

Revision History

  • 2015-01-14
    Type: Database references
  • 2015-01-21
    Type: Database references
  • 2015-02-04
    Type: Derived calculations
  • 2017-09-06
    Type: Author supporting evidence, Database references, Derived calculations, Other, Source and taxonomy