4JAM

Crystal structure of broadly neutralizing anti-hiv-1 antibody ch103


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.169

Literature

Macromolecules
Sequence Display for 4JAM

Classification: IMMUNE SYSTEM

Total Structure Weight: 95235.44

Macromolecule Entities
Molecule Chains Length Organism Details
ANTIGEN BINDING FRAGMENT OF HEAVY CHAIN of CH103 A, H 226 Homo sapiens
ANTIGEN BINDING FRAGMENT OF LIGHT CHAIN of CH103 B, L 209 Homo sapiens

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, H, L SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

H GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B, H, L 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.169
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 43.03 α = 90.00
b = 146.38 β = 97.71
c = 66.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-18
  • Released Date: 2013-04-03
  • Deposition author(s): Zhou, T., Moquin, S., Zheng, A., Srivatsan, S., Kwong, P.D.

Revision History

  • 2013-04-17
    Type: Database references
  • 2013-05-01
    Type: Database references
  • 2013-05-29
    Type: Database references