4IW7

Crystal structure of 8-amino-7-oxononanoate synthase (bioF) from Francisella tularensis.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal structure of 8-amino-7-oxononanoate synthase (bioF) from Francisella tularensis.

Newcomb, W.Niedzialkowska, E.Porebski, P.J.Grimshaw, S.Anderson, W.F.Minor, W.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
8-amino-7-oxononanoate synthase399Francisella tularensis subsp. tularensis SCHU S4Mutation(s): 0 
Gene Names: bioFFTT0936cFTT_0936c
EC: 2.3.1.47
UniProt
Find proteins for Q5NGB3 (Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4))
Explore Q5NGB3 
Go to UniProtKB:  Q5NGB3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5NGB3
Sequence Annotations
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
CSD
Query on CSD
A
L-PEPTIDE LINKINGC3 H7 N O4 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 
  • Space Group: H 3 2
  • Diffraction Data: https://doi.org/10.18430/M34IW7
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 113.486α = 90
b = 113.486β = 90
c = 158.128γ = 120
Software Package:
Software NamePurpose
HKL-3000phasing
MOLREPphasing
REFMACrefinement
Cootmodel building
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2013-02-13
    Type: Initial release
  • Version 1.1: 2014-11-12
    Changes: Structure summary
  • Version 1.2: 2017-11-15
    Changes: Refinement description
  • Version 1.3: 2022-04-13
    Changes: Database references, Derived calculations, Structure summary
  • Version 1.4: 2023-09-20
    Changes: Data collection, Refinement description