4I18

Crystal structure of human prolactin receptor complexed with Fab fragment


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.24 Å
  • R-Value Free: 0.246 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.194 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Engineering synthetic antibody binders for allosteric inhibition of prolactin receptor signaling.

Rizk, S.S.Kouadio, J.L.Szymborska, A.Duguid, E.M.Mukherjee, S.Zheng, J.Clevenger, C.V.Kossiakoff, A.A.

(2015) Cell Commun Signal 13: 1-1

  • DOI: https://doi.org/10.1186/s12964-014-0080-8
  • Primary Citation of Related Structures:  
    4I18

  • PubMed Abstract: 

    Many receptors function by binding to multiple ligands, each eliciting a distinct biological output. The extracellular domain of the human prolactin receptor (hPRL-R) uses an identical epitope to bind to both prolactin (hPRL) and growth hormone (hGH), yet little is known about how each hormone binding event triggers the appropriate response.


  • Organizational Affiliation

    Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL, USA. srizk@nd.edu.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
antibody light chainA [auth L],
C [auth B]
217Mus musculusMutation(s): 0 
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
antibody heavy chainB [auth H],
D [auth A]
236Mus musculusMutation(s): 0 
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Prolactin receptorE [auth R],
F [auth C]
211Homo sapiensMutation(s): 0 
Gene Names: PRLR
UniProt & NIH Common Fund Data Resources
Find proteins for P16471 (Homo sapiens)
Explore P16471 
Go to UniProtKB:  P16471
PHAROS:  P16471
GTEx:  ENSG00000113494 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP16471
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.24 Å
  • R-Value Free: 0.246 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.194 
  • Space Group: P 61
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 285.826α = 90
b = 285.826β = 90
c = 62.248γ = 120
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
DENZOdata reduction

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-11-20
    Type: Initial release
  • Version 1.1: 2015-01-28
    Changes: Database references
  • Version 1.2: 2017-11-15
    Changes: Refinement description
  • Version 1.3: 2023-09-20
    Changes: Data collection, Database references, Derived calculations, Refinement description