Download MendeleyCrystal structure and substrate-binding mode of cellulase Cel5A from a metagenome library
Zhuang, N., Lee, K.H.To be published.
4HTY
Crystal Structure of a metagenome-derived cellulase Cel5A
- PDB DOI: https://doi.org/10.2210/pdb4HTY/pdb
- Classification: HYDROLASE
- Organism(s): uncultured bacterium
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2012-11-02 Released: 2012-12-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.169
- R-Value Work: 0.154
- R-Value Observed: 0.155
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cellulase | 359 | uncultured bacterium | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for I6PLH5 (uncultured bacterium) Explore I6PLH5 Go to UniProtKB: I6PLH5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | I6PLH5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | B [auth A], C [auth A], D [auth A], E [auth A], F [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.169
- R-Value Work: 0.154
- R-Value Observed: 0.155
- Space Group: P 21 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 137.771 | α = 90 |
| b = 137.771 | β = 90 |
| c = 137.771 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| SOLVE | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2012-12-05 Deposition Author(s): Zhuang, N., Lee, K.H.
Revision History (Full details and data files)
- Version 1.0: 2012-12-05
Type: Initial release
