Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene
Ferraro, D.J., Ramaswamy, S.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Naphthalene 1,2-dioxygenase subunit alpha | 446 | Pseudomonas sp. C18 | Mutation(s): 0  Gene Names: doxB, NC_004999.1 EC: 1.14.12.12 | ||
UniProt | |||||
Find proteins for P0A111 (Pseudomonas sp. (strain C18)) Explore P0A111  Go to UniProtKB:  P0A111 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A111 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Naphthalene 1,2-dioxygenase subunit beta | 192 | Pseudomonas sp. C18 | Mutation(s): 0  Gene Names: doxD, NC_004999.1 EC: 1.14.12.12 | ||
UniProt | |||||
Find proteins for P0A113 (Pseudomonas sp. (strain C18)) Explore P0A113  Go to UniProtKB:  P0A113 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A113 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FES Query on FES | C [auth A] | FE2/S2 (INORGANIC) CLUSTER Fe2 S2 NIXDOXVAJZFRNF-UHFFFAOYSA-N | |||
15O Query on 15O | E [auth A] | 1-chloronaphthalene C10 H7 Cl JTPNRXUCIXHOKM-UHFFFAOYSA-N | |||
SO4 Query on SO4 | H [auth A], L [auth A], O [auth B], P [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
EDO Query on EDO | F [auth A] G [auth A] I [auth A] J [auth A] K [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
FE Query on FE | D [auth A] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 139.957 | α = 90 |
b = 139.957 | β = 90 |
c = 208.417 | γ = 120 |
Software Name | Purpose |
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d*TREK | data reduction |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
ADSC | data collection |
d*TREK | data scaling |
AMoRE | phasing |