4DBV

GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE MUTANT WITH LEU 33 REPLACED BY THR, THR 34 REPLACED BY GLY, ASP 36 REPLACED BY GLY, LEU 187 REPLACED BY ALA, AND PRO 188 REPLACED BY SER COMPLEXED WITH NADP+


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.147

Literature

Macromolecules
Sequence Display for 4DBV

Classification: OXIDOREDUCTASE

Total Structure Weight: 147049.34

Macromolecule Entities
Molecule Chains Length Organism Details
GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE O, P, Q, R 334 Geobacillus stearothermophilus EC#: 1.2.1.12 IUBMB
Mutation: L33T, T34G, D36G, L187A, P188S
Gene Name(s): gap
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDP
Query on NDP

O, P, Q, R NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

O, P, Q, R SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.147
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 134.14 α = 90.00
b = 123.95 β = 90.00
c = 96.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-01-06
  • Released Date: 1997-07-07
  • Deposition author(s): Didierjean, C., Rahuel-Clermont, S., Vitoux, B., Dideberg, O., Branlant, G., Aubry, A.

Revision History

  • 2008-03-25
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance