The structure of SfsA and its DNA complex; A DNA/RNA nuclease with a novel domain combination
Allen, F.L., Akerboom, J., Bliss, S.J., Blombach, F., Sedelnikova, S.E., van der Oost, J., Baker, P.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Sugar fermentation stimulation protein homolog | 231 | Pyrococcus furiosus DSM 3638 | Mutation(s): 1  Gene Names: sfsA, PF1198 | ||
UniProt | |||||
Find proteins for Q8U1K8 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U1K8  Go to UniProtKB:  Q8U1K8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8U1K8 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
5'-D(*CP*GP*CP*TP*GP*TP*CP*TP*CP*GP*CP*T)-3' | C [auth X], D | 12 | N/A | ||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 80.7 | α = 90 |
b = 42.69 | β = 104.92 |
c = 88.9 | γ = 90 |
Software Name | Purpose |
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GDA | data collection |
PHASER | phasing |
REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |