4BVN

Ultra-thermostable beta1-adrenoceptor with cyanopindolol bound


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 4BVN

Classification: SIGNALING PROTEIN

Total Structure Weight: 38910.10

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-1 ADRENERGIC RECEPTOR A 315 Meleagris gallopavo Mutation: R68S, M90V, C116L, I129V, Y227A, A282L, D322K, F327A, F338M, Y343L, C358A
Details: RESIDUES 3-32 AT THE N-TERMINUS AND RESIDUES 244-271 OF THE THIRD INTRACELLULAR LOOP WERE DELETED FROM THE CONSTRUCT. THE CONSTRUCT WAS TRUNCATED AFTER RESIDUE 367 AND A HEXAHIS TAG ADDED.
Gene Name(s): ADRB1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: G Protein-Coupled Receptors (GPCRs)

Protein Name: β1 adrenergic receptor (engineered)


Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OLC
Query on OLC

A (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
1-Oleoyl-R-glycerol (Synonym)
C21 H40 O4
RZRNAYUHWVFMIP-GDCKJWNLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
P32
Query on P32

A 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}- 3H-indole-2-carbonitrile
C16 H21 N3 O2
CQEFAUFOQSCRMZ-LBPRGKRZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MHA
Query on MHA

A (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID
N-(2-ACETAMIDO)IMINODIACETIC ACID (Synonym)
C6 H10 N2 O5
QZTKDVCDBIDYMD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.193
  • Space Group: P 21 2 21

Unit Cell:

Length (Å) Angle (°)
a = 53.09 α = 90.00
b = 62.13 β = 90.00
c = 95.78 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-26
  • Released Date: 2014-04-02
  • Deposition author(s): Miller, J., Nehme, R., Warne, T., Edwards, P.C., Leslie, A.G.W., Schertler, G., Tate, C.G.

Revision History

No revisions since initial release