4AH2

HLA-DR1 with covalently linked CLIP106-120 in canonical orientation

Structural Biology Knowledgebase: 4AH2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.36 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.191

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AH2

Classification: IMMUNE SYSTEM

Total Structure Weight: 48471.86

Macromolecule Entities
Molecule Chains Length Organism Details
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN A 193 Homo sapiens Fragment: EXTRACELLULAR DOMAIN, RESIDUES 26-217
Gene Name(s): HLA-DRA Gene View HLA-DRA1
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN GAMMA CHAIN, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN\,DRB1-1 BETA CHAIN B 229 Homo sapiens Fragment: EXTRACELLULAR DOMAIN, RESIDUES 106-120,30-227
Gene Name(s): HLA-DRB1 Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.36 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.191
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 57.64 α = 90.00
b = 65.62 β = 90.00
c = 131.33 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-03
  • Released Date: 2012-08-01
  • Deposition author(s): Schlundt, A., Guenther, S., Sticht, J., Wieczorek, M., Roske, Y., Heinemann, U., Freund, C.

Revision History

  • 2012-10-10
    Type: Citation | Details: JRNL