4ZWJ

Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.252

Literature

Macromolecules
Sequence Display for 4ZWJ

Classification: SIGNALING PROTEIN

Total Structure Weight: 403444.41

Macromolecule Entities
Molecule Chains Length Organism Details
Chimera protein of human Rhodopsin, mouse S-arrestin, and T4 Endolysin A, B, C, D 906 Homo sapiens Mus musculus Enterobacteria phage t4 sensu lato EC#: 3.1.1 IUBMB 3.2.1.17 IUBMB
Mutation: R1012G, C1054T, C1097A, I1137R, N2C, E113Q, M257Y, N282C, L2374A, V2375A, F2376A
Gene Name(s): E RHO Gene View OPN2 Sag
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: G Protein-Coupled Receptors (GPCRs)

Protein Name: Human rhodopsin with bound mouse visual arrestin



Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.252
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 109.24 α = 90.00
b = 109.24 β = 90.00
c = 452.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-05-19
  • Released Date: 2015-07-29
  • Deposition author(s): Kang, Y., Zhou, X.E., Gao, X., He, Y., Liu, W., Ishchenko, A., Barty, A., White, T.A., Yefanov, O., Han, G.W., Xu, Q., de Waal, P.W., Ke, J., Tan, M.H.E., Zhang, C., Moeller, A., West, G.M., Pascal, B., Eps, N.V., Caro, L.N., Vishnivetskiy, S.A., Lee, R.J., Suino-Powell, K.M., Gu, X., Pal, K., Ma, J., Zhi, X., Boutet, S., Williams, G.J., Messerschmidt, M., Gati, C., Zatsepin, N.A., Wang, D., James, D., Basu, S., Roy-Chowdhury, S., Conrad, C., Coe, J., Liu, H., Lisova, S., Kupitz, C., Grotjohann, I., Fromme, R., Jiang, Y., Tan, M., Yang, H., Li, J., Wang, M., Zheng, Z., Li, D., Howe, N., Zhao, Y., Standfuss, J., Diederichs, K., Dong, Y., Potter, C.S., Carragher, B., Caffrey, M., Jiang, H., Chapman, H.N., Spence, J.C.H., Fromme, P., Weierstall, U., Ernst, O.P., Katritch, V., Gurevich, V.V., Griffin, P.R., Hubbell, W.L., Stevens, R.C., Cherezov, V., Melcher, K., Xu, H.E., GPCR Network (GPCR)

Revision History

  • 2015-08-05
    Type: Database references
  • 2015-08-12
    Type: Database references