4WZ0

Crystal structure of U-box 1 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris

Structural Biology Knowledgebase: 4WZ0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.234

Literature

Macromolecules
Sequence Display for 4WZ0

Classification: LIGASE

Total Structure Weight: 12605.29

Macromolecule Entities
Molecule Chains Length Organism Details
E3 ubiquitin-protein ligase LubX A 109 Legionella pneumophila EC#: 6.3.2 IUBMB
Fragment: residues 9-117
Gene Name(s): lubX lpp2887
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET
CSD
Query on CSD
A L-PEPTIDE LINKING C3 H7 N O4 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.234
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 75.33 α = 90.00
b = 90.62 β = 90.00
c = 40.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-11-18
  • Released Date: 2015-01-14
  • Deposition author(s): Stogios, P.J., Quaile, A.T., Skarina, T., Stein, A., Di Leo, R., Yim, V., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2015-08-19
    Type: Citation | Details: Citation
  • 2015-07-29
    Type: Citation | Details: Citation