4WHI

Crystal structure of C-terminal domain of penicillin binding protein Rv0907

Structural Biology Knowledgebase: 4WHI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.160

Literature

Macromolecules
Sequence Display for 4WHI

Classification: HYDROLASE

Total Structure Weight: 12481.24

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-lactamase A 102 Mycobacterium tuberculosis Fragment: C-terminal domain residues 464-562
Gene Name(s): LH57_04935
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BR
Query on BR

A BROMIDE ION
Br
CPELXLSAUQHCOX-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.160
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 35.31 α = 90.00
b = 49.84 β = 90.00
c = 59.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-09-22
  • Released Date: 2014-10-08
  • Deposition author(s): Chang, C., Hatzos-Skintges, C., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2015-02-04
    Type: Biological assembly | Details: Biological assembly