4WAC

Crystal Structure of TarM

Structural Biology Knowledgebase: 4WAC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 4WAC

Classification: TRANSFERASE

Total Structure Weight: 58354.76

Macromolecule Entities
Molecule Chains Length Organism Details
Glycosyl transferase, group 1 family protein A 498 Staphylococcus aureus EC#: 2.4.1.5 IUBMB 2.4.1.52 IUBMB
Gene Name(s): tagE_3 tagE_1 CH51_05015 EQ80_004745 ER12_004740 ERS092844_00476 ERS195423_00167 ERS365775_00359 ERS410449_01385 ERS411009_00387 ERS411017_00388 ERS445052_02328 RL02_08685
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PEG
Query on PEG

A DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IMD
Query on IMD

A IMIDAZOLE
C3 H5 N2
RAXXELZNTBOGNW-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.215
  • Space Group: P 63 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 124.75 α = 90.00
b = 124.75 β = 90.00
c = 223.26 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-08-29
  • Released Date: 2015-02-25
  • Deposition author(s): Koc, C., Stehle, T., Xia, G., Peschel, A.

Revision History

  • 2015-04-22
    Type: Citation | Details: Citation
  • 2015-03-04
    Type: Biological assembly | Details: Biological assembly