4V5X

The cryo-EM structure of a 3D DNA-origami object


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 11.5 Å
  • Aggregation State: Particle
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 4V5X

Classification: DNA

Total Structure Weight: 4691841.00

Macromolecule Entities
Molecule Chains Length Organism Details
SCAFFOLD STRAND AA 4896 Escherichia virus m13 ISOLATED M13 PHAGE GENOME (SINGLE-STRANDED)
SCAFFOLD STRAND BA 2353 Escherichia virus m13 ISOLATED M13 PHAGE GENOME (SINGLE-STRANDED)
STAPLE STRAND A0 55 Synthetic construct
STAPLE STRAND A1 44 Synthetic construct
STAPLE STRAND A2 50 Synthetic construct
STAPLE STRAND A3 40 Synthetic construct
STAPLE STRAND A4 48 Synthetic construct
STAPLE STRAND A5 48 Synthetic construct
STAPLE STRAND A6 50 Synthetic construct
STAPLE STRAND A7 48 Synthetic construct
STAPLE STRAND A8 48 Synthetic construct
STAPLE STRAND AB 40 Synthetic construct
STAPLE STRAND AC 48 Synthetic construct
STAPLE STRAND AD 50 Synthetic construct
STAPLE STRAND AE 46 Synthetic construct
STAPLE STRAND AF 48 Synthetic construct
STAPLE STRAND AG 46 Synthetic construct
STAPLE STRAND AH 48 Synthetic construct
STAPLE STRAND AI 48 Synthetic construct
STAPLE STRAND AJ 52 Synthetic construct
STAPLE STRAND AK 60 Synthetic construct
STAPLE STRAND AL 48 Synthetic construct
STAPLE STRAND AM 50 Synthetic construct
STAPLE STRAND AN 48 Synthetic construct
STAPLE STRAND AO 48 Synthetic construct
STAPLE STRAND AP 40 Synthetic construct
STAPLE STRAND AQ 57 Synthetic construct
STAPLE STRAND AR 63 Synthetic construct
STAPLE STRAND AS 64 Synthetic construct
STAPLE STRAND AT 48 Synthetic construct
STAPLE STRAND AU 48 Synthetic construct
STAPLE STRAND AV 52 Synthetic construct
STAPLE STRAND AW 50 Synthetic construct
STAPLE STRAND AX 48 Synthetic construct
STAPLE STRAND AY 42 Synthetic construct
STAPLE STRAND AZ 54 Synthetic construct
STAPLE STRAND Ab 45 Synthetic construct
STAPLE STRAND Ac 70 Synthetic construct
STAPLE STRAND Ad 48 Synthetic construct
STAPLE STRAND Af 48 Synthetic construct
STAPLE STRAND Ag 48 Synthetic construct
STAPLE STRAND Ah 44 Synthetic construct
STAPLE STRAND Ai 46 Synthetic construct
STAPLE STRAND Aj 62 Synthetic construct
STAPLE STRAND Ak 46 Synthetic construct
STAPLE STRAND Al 48 Synthetic construct
STAPLE STRAND Am 48 Synthetic construct
STAPLE STRAND An 48 Synthetic construct
STAPLE STRAND Ao 36 Synthetic construct
STAPLE STRAND As 48 Synthetic construct
STAPLE STRAND Au 48 Synthetic construct
STAPLE STRAND Av 48 Synthetic construct
STAPLE STRAND Aw 48 Synthetic construct
STAPLE STRAND Ax 52 Synthetic construct
STAPLE STRAND Ay 38 Synthetic construct
STAPLE STRAND Az 51 Synthetic construct
STAPLE STRAND B0 48 Synthetic construct
STAPLE STRAND B1 59 Synthetic construct
STAPLE STRAND B2 36 Synthetic construct
STAPLE STRAND B3 48 Synthetic construct
STAPLE STRAND B4 48 Synthetic construct
STAPLE STRAND B5 40 Synthetic construct
STAPLE STRAND B6 50 Synthetic construct
STAPLE STRAND B7 44 Synthetic construct
STAPLE STRAND B8 40 Synthetic construct
STAPLE STRAND B9 55 Synthetic construct
STAPLE STRAND BB 48 Synthetic construct
STAPLE STRAND BC 44 Synthetic construct
STAPLE STRAND BD 35 Synthetic construct
STAPLE STRAND BE 68 Synthetic construct
STAPLE STRAND BF 40 Synthetic construct
STAPLE STRAND BG 49 Synthetic construct
STAPLE STRAND BH 42 Synthetic construct
STAPLE STRAND BI 42 Synthetic construct
STAPLE STRAND BJ 58 Synthetic construct
STAPLE STRAND BK 44 Synthetic construct
STAPLE STRAND BL 48 Synthetic construct
STAPLE STRAND BM 52 Synthetic construct
STAPLE STRAND BN 63 Synthetic construct
STAPLE STRAND BO 49 Synthetic construct
STAPLE STRAND BP 66 Synthetic construct
STAPLE STRAND BQ 48 Synthetic construct
STAPLE STRAND BR 64 Synthetic construct
STAPLE STRAND BS 48 Synthetic construct
STAPLE STRAND BT 52 Synthetic construct
STAPLE STRAND BU 55 Synthetic construct
STAPLE STRAND BV 44 Synthetic construct
STAPLE STRAND BW 53 Synthetic construct
STAPLE STRAND BX 48 Synthetic construct
STAPLE STRAND BY 48 Synthetic construct
STAPLE STRAND BZ 66 Synthetic construct
STAPLE STRAND Ba 48 Synthetic construct
STAPLE STRAND Bb 68 Synthetic construct
STAPLE STRAND Bc 50 Synthetic construct
STAPLE STRAND Bd 56 Synthetic construct
STAPLE STRAND Be 48 Synthetic construct
STAPLE STRAND Bf 48 Synthetic construct
STAPLE STRAND Bg 47 Synthetic construct
STAPLE STRAND Bh 48 Synthetic construct
STAPLE STRAND Bi 67 Synthetic construct
STAPLE STRAND Bj 45 Synthetic construct
STAPLE STRAND Bk 67 Synthetic construct
STAPLE STRAND Bl 48 Synthetic construct
STAPLE STRAND Bm 48 Synthetic construct
STAPLE STRAND Bn 67 Synthetic construct
STAPLE STRAND Bo 67 Synthetic construct
STAPLE STRAND Bp 48 Synthetic construct
STAPLE STRAND Bq 58 Synthetic construct
STAPLE STRAND Br 51 Synthetic construct
STAPLE STRAND Bs 54 Synthetic construct
STAPLE STRAND C0 41 Synthetic construct
STAPLE STRAND C1 51 Synthetic construct
STAPLE STRAND C2 56 Synthetic construct
STAPLE STRAND C3 48 Synthetic construct
STAPLE STRAND C4 71 Synthetic construct
STAPLE STRAND C5 62 Synthetic construct
STAPLE STRAND C6 48 Synthetic construct
STAPLE STRAND C7 52 Synthetic construct
STAPLE STRAND C8 44 Synthetic construct
STAPLE STRAND CB 54 Synthetic construct
STAPLE STRAND CC 47 Synthetic construct
STAPLE STRAND CD 48 Synthetic construct
STAPLE STRAND CE 40 Synthetic construct
STAPLE STRAND CF 40 Synthetic construct
STAPLE STRAND CG 44 Synthetic construct
STAPLE STRAND CH 48 Synthetic construct
STAPLE STRAND CI 44 Synthetic construct
STAPLE STRAND CJ 59 Synthetic construct
STAPLE STRAND CK 48 Synthetic construct
STAPLE STRAND CL 48 Synthetic construct
STAPLE STRAND CM 54 Synthetic construct
STAPLE STRAND CN 41 Synthetic construct
STAPLE STRAND CO 48 Synthetic construct
STAPLE STRAND CP 56 Synthetic construct
STAPLE STRAND CQ 38 Synthetic construct
STAPLE STRAND CR 48 Synthetic construct
STAPLE STRAND CS 48 Synthetic construct
STAPLE STRAND CT 48 Synthetic construct
STAPLE STRAND CU 32 Synthetic construct
STAPLE STRAND CV 53 Synthetic construct
STAPLE STRAND CW 38 Synthetic construct
STAPLE STRAND CX 47 Synthetic construct
STAPLE STRAND CY 43 Synthetic construct
STAPLE STRAND CZ 48 Synthetic construct
STAPLE STRAND Cb 44 Synthetic construct
STAPLE STRAND Cc 62 Synthetic construct
STAPLE STRAND Cd 42 Synthetic construct
STAPLE STRAND Ce 52 Synthetic construct
STAPLE STRAND Cf 48 Synthetic construct
STAPLE STRAND Cg 46 Synthetic construct
STAPLE STRAND Ch 47 Synthetic construct
STAPLE STRAND Ck 29 Synthetic construct
STAPLE STRAND Cp 48 Synthetic construct
STAPLE STRAND Cq 40 Synthetic construct
STAPLE STRAND Cr 46 Synthetic construct
STAPLE STRAND Cs 49 Synthetic construct
STAPLE STRAND Ct 44 Synthetic construct
STAPLE STRAND Cu 60 Synthetic construct
STAPLE STRAND Cv 46 Synthetic construct
STAPLE STRAND Cw 54 Synthetic construct
STAPLE STRAND Cx 46 Synthetic construct
STAPLE STRAND Cy 66 Synthetic construct
STAPLE STRAND Cz 48 Synthetic construct


Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 11.5 Å
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2012-10-09
  • Released Date: 2014-07-09
  • Deposition author(s): Bai, X.C., Martin, T.G., Scheres, S.H.W., Dietz, H.
  • Previous versions: 2YMF 2YMG 2YMH 2YMI 2YMR

Revision History

  • 2014-12-10
    Type: Other
  • 2015-03-25
    Type: Other
  • 2017-08-02
    Type: Advisory, Atomic model, Data collection, Derived calculations