4QTR

Computational design of co-assembling protein-DNA nanowires


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.322
  • R-Value Work: 0.264

Literature

Macromolecules
Sequence Display for 4QTR

Classification: de novo design / DNA

Total Structure Weight: 54320.50


Macromolecule Entities
Molecule Chains Length Organism Details
dualENH A, B, C, D 72 Drosophila melanogaster Details: A computationally designed protein using wild-type engrailed homeodomain as the backbone template
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(P*GP*TP*GP*TP*AP*AP*TP*TP*TP*AP*AP*TP*TP*TP*CP*C)-3') E, G 16 synthetic A short NA strand with engrailed homeodomain binding motifs
DNA (5'-D(P*CP*GP*GP*AP*AP*AP*TP*TP*AP*AP*AP*TP*TP*AP*CP*A)-3') F, H 16 synthetic A short NA strand with engrailed homeodomain binding motifs


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.322
  • R-Value Work: 0.264
  • Space Group: P 42 2 2

Unit Cell:

Length (Å) Angle (°)
a = 90.10 α = 90.00
b = 90.10 β = 90.00
c = 158.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-07-08
  • Released Date: 2015-07-29
  • Deposition author(s): Mou, Y., Mayo, S.L.

Revision History

  • Version 1_0: 2015-07-29

    Type: Initial release

  • Version 1_1: 2015-09-09

    Type: Database references

  • Version 1_2: 2015-09-30

    Type: Database references