4QE8

FXR with DM175 and NCoA-2 peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.62 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.249

Literature

Macromolecules
Sequence Display for 4QE8

Classification: Transcription

Total Structure Weight: 59006.23

Macromolecule Entities
Molecule Chains Length Organism Details
Bile acid receptor A, B 233 Homo sapiens Fragment: unp residues 258-486
Gene Name(s): NR1H4 Gene View BAR FXR HRR1 RIP14
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Nuclear receptor coactivator 2 C, D 13 Homo sapiens Fragment: unp residues 740-752
Gene Name(s): NCOA2 Gene View BHLHE75 SRC2 TIF2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
31D
Query on 31D

A, B 4-({2-[(4-tert-butylbenzoyl)amino]benzoyl}amino)benzoic acid
C25 H24 N2 O4
JNIQPWWGQWIPLQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MRD
Query on MRD

B (4R)-2-METHYLPENTANE-2,4-DIOL
C6 H14 O2
SVTBMSDMJJWYQN-RXMQYKEDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.62 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.249
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 34.48 α = 88.89
b = 48.68 β = 78.10
c = 82.20 γ = 85.07

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-05-15
  • Released Date: 2015-08-12
  • Deposition author(s): Kudlinzki, D., Merk, D., Linhard, V.L., Saxena, K., Sreeramulu, S., Nilsson, E., Dekker, N., Wissler, L., Bamberg, K., Schubert-Zsilavecz, M., Schwalbe, H.

Revision History

No revisions since initial release