4QE6

FXR with CDCA and NCoA-2 peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 4QE6

Classification: Transcription

Total Structure Weight: 29264.96

Macromolecule Entities
Molecule Chains Length Organism Details
Bile acid receptor A 233 Homo sapiens Fragment: unp residues 258-486
Gene Name(s): NR1H4 Gene View BAR FXR HRR1 RIP14
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Nuclear receptor coactivator 2 B 13 Homo sapiens Fragment: unp residues 740-752
Gene Name(s): NCOA2 Gene View BHLHE75 SRC2 TIF2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
JN3
Query on JN3

A CHENODEOXYCHOLIC ACID
7BETA,,5ALPHA (Synonym)
C24 H40 O4
RUDATBOHQWOJDD-BSWAIDMHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
JN3 EC50: 3400 - 30000 nM (95 - 100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.194
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 84.45 α = 90.00
b = 33.82 β = 101.48
c = 83.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-05-15
  • Released Date: 2015-08-12
  • Deposition author(s): Kudlinzki, D., Merk, D., Linhard, V.L., Saxena, K., Sreeramulu, S., Nilsson, E., Dekker, N., Wissler, L., Bamberg, K., Schubert-Zsilavecz, M., Schwalbe, H.

Revision History

No revisions since initial release