4OSD

Dimer of a C-terminal fragment of phage T4 gp5 beta-helix


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 4OSD

Classification: HYDROLASE

Total Structure Weight: 181505.33

Macromolecule Entities
Molecule Chains Length Organism Details
Tail-associated lysozyme A, B, C..., D, E, F, G, H, I, J, K, L, M, N, O, P, Q, RA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R 95 Enterobacteria phage t4 sensu lato EC#: 3.2.1.17 IUBMB
Fragment: C-terminal fragment, UNP RESIDUES 484-575
Gene Name(s): 5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
STE
Query on STE

C, F, G, K, O, P STEARIC ACID
C18 H36 O2
QIQXTHQIDYTFRH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ELA
Query on ELA

A, F, G, J, M, P 9-OCTADECENOIC ACID
C18 H34 O2
ZQPPMHVWECSIRJ-MDZDMXLPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PLM
Query on PLM

D, H, K, N, Q PALMITIC ACID
C16 H32 O2
IPCSVZSSVZVIGE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

B, F, H, L, O, Q MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.219
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 110.29 α = 90.00
b = 73.79 β = 113.39
c = 111.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-02-12
  • Released Date: 2015-02-18
  • Deposition author(s): Buth, S.A., Leiman, P.G., Shneider, M.M.

Revision History

  • Version 1_0: 2015-02-18

    Type: Initial release