4OPW

Crystal structure of a putative adhesin (PARMER_02777) from Parabacteroides merdae ATCC 43184 at 1.75 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 4OPW

Classification: CELL ADHESION

Total Structure Weight: 52633.44

Macromolecule Entities
Molecule Chains Length Organism Details
Uncharacterized protein A, B 241 Parabacteroides merdae Fragment: UNP residues 22-261
Gene Name(s): PARMER_02777
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 59.86 α = 90.00
b = 70.85 β = 90.00
c = 118.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-02-06
  • Released Date: 2014-04-02
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

No revisions since initial release