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Crystal Structure of Human Argonaute2 Bound to Tryptophan
DOI:10.2210/pdb4olb/pdb   NDB ID: NA2875
4OLB
ENTRY 4OLB SUPERSEDES 4EI3
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 101011.44
    Molecule: Protein argonaute-2
    Polymer: 1 Type: protein Length: 859
    Chains: A
    EC#: 3.1.26   
    Mutation: S387D
    Organism: Homo sapiens
    Gene Names: Gene View for AGO2 EIF2C2
    UniProtKB: Protein Feature View | Search PDB | Q9UKV8  
    Molecule: 5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*U)-3'
    Polymer: 2 Type: rna Length: 10
    Chains: B
    Organism: Homo sapiens
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    4OLA   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    TRP
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    TRP C11 H12 N2 O2
    TRYPTOPHAN
    TRP:4OLB
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2875
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Schirle, N.T.,  MacRae, I.J.

    Deposition:   2014-01-23
    Release:   2014-02-05

    Previous versions:  4EI3
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.90
    R-Value: 0.212 (obs.)
    R-Free: 0.249
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 63.21 α = 90.00 
    b = 106.75 β = 107.01 
    c = 68.34 γ = 90.00