4OLB

Crystal Structure of Human Argonaute2 Bound to Tryptophan

Structural Biology Knowledgebase: 4OLB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.210

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4OLB

Classification: HYDROLASE / RNA

Total Structure Weight: 101011.48


Macromolecule Entities
Molecule Chains Length Organism Details
Protein argonaute-2 A 859 Homo sapiens EC#: 3.1.26.n2 IUBMB
Mutation: S387D
Gene Name(s): AGO2 Gene View EIF2C2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*U)-3' B 10 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRP
Query on TRP

A TRYPTOPHAN
C11 H12 N2 O2
QIVBCDIJIAJPQS-VIFPVBQESA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.210
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 63.21 α = 90.00
b = 106.75 β = 107.01
c = 68.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-23
  • Released Date: 2014-02-05
  • Deposition author(s): Schirle, N.T., MacRae, I.J.
  • Previous versions: 4EI3

Revision History

No revisions since initial release