4OJC

Crystal structure of the wild-type full-length trimeric ectodomain of the C. elegans fusion protein EFF-1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.93 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 4OJC

Classification: MEMBRANE PROTEIN

Total Structure Weight: 66918.24

Macromolecule Entities
Molecule Chains Length Organism Details
EFF-1A A 580 Caenorhabditis elegans Fragment: UNP residues 23-561
Gene Name(s): eff-1 C26D10.5 CELE_C26D10.5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.93 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.220
  • Space Group: I 21 3

Unit Cell:

Length (Å) Angle (°)
a = 173.70 α = 90.00
b = 173.70 β = 90.00
c = 173.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-21
  • Released Date: 2014-05-14
  • Deposition author(s): Krey, T., Rey, F.A.

Revision History

  • Version 1_0: 2014-05-14

    Type: Initial release