4OD7

Complex structure of Proteus mirablis DsbA (C30S) with a non-covalently bound peptide PWATCDS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.172

Literature

Macromolecules
Sequence Display for 4OD7

Classification: OXIDOREDUCTASE / PEPTIDE

Total Structure Weight: 65675.84

Macromolecule Entities
Molecule Chains Length Organism Details
Thiol:disulfide interchange protein A, B, C 190 Proteus mirabilis Mutation: C30S
Gene Name(s): dsbA PMI2828
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
(ACE)PWATCDS(NH2) Peptide D, E, F 9 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SCN
Query on SCN

A, C THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
D, E, F NON-POLYMER C2 H4 O --
NH2
Query on NH2
D, E, F NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.172
  • Space Group: P 32

Unit Cell:

Length (Å) Angle (°)
a = 74.06 α = 90.00
b = 74.06 β = 90.00
c = 93.27 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-10
  • Released Date: 2014-05-28
  • Deposition author(s): Kurth, F., Premkumar, L., Martin, J.L.

Revision History

  • Version 1_0: 2014-05-28

    Type: Initial release

  • Version 1_1: 2014-07-30

    Type: Database references