4O41

Amide linked RNA

Structural Biology Knowledgebase: 4O41 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.147

Literature

Macromolecules
Sequence Display for 4O41

Classification: RNA

Total Structure Weight: 16461.49

Macromolecule Entities
Molecule Chains Length Organism Details
AMIDE LINKED RNA A, B, C, D 12 synthetic Short NA strands UGAGC(URU)CGGCUC, where URU represents the amide linked residue

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SR
Query on SR

A STRONTIUM ION
Sr
PWYYWQHXAPXYMF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
URU
Query on URU
A, B, C, D RNA LINKING C20 H26 N5 O14 P --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.147
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 22.36 α = 110.03
b = 34.33 β = 94.24
c = 43.30 γ = 95.83

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2013-12-18
  • Released Date: 2014-07-09
  • Deposition author(s): Pallan, P.S., Egli, M.

Revision History

  • 2014-09-03
    Type: Refinement description | Details: --