4NN5

Cytokine receptor complex - Crystal form 1A

Structural Biology Knowledgebase: 4NN5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.201
  • R-Value Work: 0.170

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4NN5

Classification: CYTOKINE / CYTOKINE RECEPTOR

Total Structure Weight: 63634.84

Macromolecule Entities
Molecule Chains Length Organism Details
Thymic stromal lymphopoietin A 130 Mus musculus Fragment: UNP residues 20-140
Mutation: N123Q
Gene Name(s): Tslp
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Interleukin-7 receptor subunit alpha B 223 Mus musculus Fragment: extracellular domain (UNP residues 21-239)
Gene Name(s): Il7r
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Cytokine receptor-like factor 2 C 212 Mus musculus Fragment: extracellular domain (UNP residues 20-222)
Mutation: N122Q, A179V
Gene Name(s): Crlf2 Crlm2 Tpte2 Tslpr
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

C N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.201
  • R-Value Work: 0.170
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 150.06 α = 90.00
b = 79.76 β = 90.00
c = 52.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-11-16
  • Released Date: 2014-03-19
  • Deposition author(s): Verstraete, K., van Schie, L., Savvides, S.N.

Revision History

  • 2014-04-16
    Type: Citation | Details: Citation update
  • 2014-04-02
    Type: Citation | Details: Citation update