4NEL

Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with N,N-dimethylmethanamine

Structural Biology Knowledgebase: 4NEL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 4NEL

Classification: TRANSCRIPTION REGULATOR

Total Structure Weight: 22397.43

Macromolecule Entities
Molecule Chains Length Organism Details
Transcriptional regulator A 190 Saccharomonospora viridis Gene Name(s): Svir_16270
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
KEN
Query on KEN

A N,N-dimethylmethanamine
C3 H9 N
GETQZCLCWQTVFV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET
CME
Query on CME
A L-PEPTIDE LINKING C5 H11 N O3 S2 CYS

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 41.86 α = 90.00
b = 109.24 β = 90.00
c = 73.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-10-29
  • Released Date: 2013-12-04
  • Deposition author(s): Halavaty, A.S., Filippova, E.V., Minasov, G., Kiryukhina, O., Shuvalova, L., Endres, M., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2013-12-11
    Type: Other | Details: TargetTrack id corrected