4MWF

Structure of Hepatitis C Virus Envelope Glycoprotein E2 core bound to broadly neutralizing antibody AR3C

Structural Biology Knowledgebase: 4MWF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.64 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.231

Literature

Macromolecules
Sequence Display for 4MWF

Classification: IMMUNE SYSTEM

Total Structure Weight: 146156.86

Macromolecule Entities
Molecule Chains Length Organism Details
Fab AR3C heavy chain A, H 233 Homo sapiens
Fab AR3C light chain B, L 214 Homo sapiens
Envelope glycoprotein E2 C, D 212 Hepatitis c virus Mutation: N448D, N576D, Y589H, R602W
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

C, D N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BMA
Query on BMA

C BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MAN
Query on MAN

C ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.64 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.231
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 47.13 α = 90.00
b = 166.55 β = 90.00
c = 209.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-09-24
  • Released Date: 2013-12-11
  • Deposition author(s): Kong, L., Wilson, I.A., Law, M.

Revision History

  • 2014-09-24
    Type: Function and keywords | Details: --