P. falciparum Calcium-Dependent Protein Kinase 2 (PfCDPK2): First Crystal Structure and Virtual Ligand Screening
Lauciello, L., Pernot, L., Bottegoni, G., Bisson, W., Scapozza, L., Perozzo, R.To be published.
Experimental Data Snapshot
Starting Model: in silico
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Calcium-dependent protein kinase 2 | 506 | Plasmodium falciparum K1 | Mutation(s): 0  Gene Names: CDPK2, CPK2, PFF0520w EC: 2.7.11.1 | ||
UniProt | |||||
Find proteins for O15865 (Plasmodium falciparum (isolate K1 / Thailand)) Explore O15865  Go to UniProtKB:  O15865 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O15865 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
STU Query on STU | B [auth A] | STAUROSPORINE C28 H26 N4 O3 HKSZLNNOFSGOKW-FYTWVXJKSA-N | |||
GOL Query on GOL | F [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
CA Query on CA | C [auth A], D [auth A], E [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 59.15 | α = 90 |
b = 92.25 | β = 90 |
c = 97.78 | γ = 90 |
Software Name | Purpose |
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PHASER | phasing |
PHENIX | refinement |
MOSFLM | data reduction |
SCALA | data scaling |