4MRU

Crystal structure of a susD homolog (BT1281) from Bacteroides thetaiotaomicron VPI-5482 at 1.90 A resolution

Structural Biology Knowledgebase: 4MRU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.176
  • R-Value Work: 0.135

Literature

Macromolecules
Sequence Display for 4MRU

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 118166.99

Macromolecule Entities
Molecule Chains Length Organism Details
SusD homolog A, B 508 Bacteroides thetaiotaomicron Gene Name(s): BT_1281
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 51.15 α = 78.73
b = 74.67 β = 73.51
c = 78.06 γ = 78.62

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-09-17
  • Released Date: 2013-10-02
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

No revisions since initial release