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d(ATCCGTTATAACGGAT) complexed with Moloney Murine Leukemia virus reverse transcriptase catalytic fragment
DOI:10.2210/pdb4m94/pdb   NDB ID: NA2647
4M94
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/dna
    Structure Weight: 34450.57
    Molecule: Gag-Pol polyprotein
    Polymer: 1 Type: protein Length: 259
    Chains: A
    EC#: 2.7.7.49    2.7.7.7    3.1.26.4   
    Fragment: UNP residues 683-937
    Organism: Moloney murine leukemia virus isolate Shinnick
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P03355  
    Molecule: 5' d(ATCCGttA) 3'
    Polymer: 2 Type: dna Length: 8
    Chains: B
    Molecule: 5' d(TAACGGAT) 3'
    Polymer: 3 Type: dna Length: 8
    Chains: G
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

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  •   Source Hide
    Polymer: 1
    Scientific Name: Moloney murine leukemia virus isolate shinnick   Taxonomy   Common Name: Momlv Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4M9E   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    EDO
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    EDO C2 H6 O2
    1,2-ETHANEDIOL
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    QBT
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    QBT C10 H17 N2 O8 P T dnaLinking
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2647
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Singh, I.

    Deposition:   2013-08-14
    Release:   2014-03-12
    Last Modified (REVDAT):   2014-04-02
     
  •   Revision History    Hide
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    2014-04-02
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.14
    R-Value: 0.202 (obs.)
    R-Free: 0.239
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 53.96 α = 90.00 
    b = 145.72 β = 90.00 
    c = 46.88 γ = 90.00