4M5V

Influenza 2009 H1N1 endonuclease with 100 millimolar calcium

Structural Biology Knowledgebase: 4M5V SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.190

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4M5V

Classification: RNA BINDING PROTEIN

Total Structure Weight: 28777.76

Macromolecule Entities
Molecule Chains Length Organism Details
Polymerase PA A 241 Influenza a virus Fragment: unp residues 1-204
Mutation: I201V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.190
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 87.50 α = 90.00
b = 101.27 β = 90.00
c = 65.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-08-08
  • Released Date: 2013-09-18
  • Deposition author(s): Bauman, J.D., Patel, D., Das, K., Arnold, E.

Revision History

  • 2013-12-11
    Type: Citation | Details: Citation update
  • 2013-12-04
    Type: Other | Details: RELATED ENTRY