4M5Q

High-resolution apo influenza 2009 H1N1 endonuclease structure

Structural Biology Knowledgebase: 4M5Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.53 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 4M5Q

Classification: RNA BINDING PROTEIN

Total Structure Weight: 28732.37

Macromolecule Entities
Molecule Chains Length Organism Details
Polymerase PA A 241 Influenza a virus Fragment: unp residues 1-204
Mutation: I201V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.53 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.171
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 88.40 α = 90.00
b = 101.49 β = 90.00
c = 66.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-08-08
  • Released Date: 2013-09-18
  • Deposition author(s): Bauman, J.D., Patel, D., Das, K., Arnold, E.

Revision History

  • 2013-12-11
    Type: Citation | Details: Citation update
  • 2013-12-04
    Type: Other | Details: RELATED ENTRY