4LSA

Crystal structure of BRI1 sud1 (Gly643Glu) bound to brassinolide

Structural Biology Knowledgebase: 4LSA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 4LSA

Classification: STEROID BINDING PROTEIN

Total Structure Weight: 87338.84

Macromolecule Entities
Molecule Chains Length Organism Details
Protein BRASSINOSTEROID INSENSITIVE 1 A 774 Arabidopsis thaliana EC#: 2.7.10.1 IUBMB 2.7.11.1 IUBMB
Fragment: receptor ectodomain/LRR-domain (UNP residues 29-788)
Mutation: G643E
Gene Name(s): BRI1 At4g39400 F23K16.30
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BLD
Query on BLD

A Brassinolide
5S, (Synonym)
C28 H48 O6
IXVMHGVQKLDRKH-KNBKMWSGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BMA
Query on BMA

A BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MAN
Query on MAN

A ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.205
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 174.03 α = 90.00
b = 67.30 β = 121.09
c = 120.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-07-22
  • Released Date: 2013-09-04
  • Deposition author(s): Santiago, J., Henzler, C., Hothorn, M.

Revision History

No revisions since initial release