4LPA

Crystal structure of a Cdc6 phosphopeptide in complex with Cks1

Structural Biology Knowledgebase: 4LPA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.245

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4LPA

Classification: PROTEIN BINDING

Total Structure Weight: 57048.43

Macromolecule Entities
Molecule Chains Length Organism Details
Cyclin-dependent kinases regulatory subunit A, B, C, D 119 Saccharomyces cerevisiae Fragment: Cyclin-dependent kinases regulatory subunit (unp residues 1-113)
Gene Name(s): CKS1 YBR135W YBR1011
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
TPO
Query on TPO
A, B, C, D L-PEPTIDE LINKING C4 H10 N O6 P THR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.245
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 84.69 α = 90.00
b = 84.69 β = 90.00
c = 239.93 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-07-15
  • Released Date: 2013-11-06
  • Deposition author(s): McGrath, D.A., Balog, E.R.M., Koivomagi, M., Lucena, R., Mai, M.V., Hirschi, A., Kellogg, D.R., Loog, M., Rubin, S.M.

Revision History

  • 2014-02-05
    Type: Citation | Details: Citation update