4LNX

Crystal structure of TR-alpha bound to T4 in a second site

Structural Biology Knowledgebase: 4LNX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.177
  • R-Value Work: 0.155

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4LNX

Classification: TRANSCRIPTION

Total Structure Weight: 32206.00

Macromolecule Entities
Molecule Chains Length Organism Details
Thyroid hormone receptor alpha A 267 Homo sapiens Fragment: UNP P10827 residues 148-370, UNP Q6LDR0 residues 36-75
Gene Name(s): THRA Gene View EAR7 ERBA1 NR1A1 THRA1 THRA2

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
T44
Query on T44

A 3,5,3',5'-TETRAIODO-L-THYRONINE
C15 H11 I4 N O4
XUIIKFGFIJCVMT-LBPRGKRZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
T3
Query on T3

A 3,5,3'TRIIODOTHYRONINE
T3; THYROID HORMONE; LIOTHYRONINE (Synonym)
C15 H12 I3 N O4
AUYYCJSJGJYCDS-LBPRGKRZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CAS
Query on CAS
A L-PEPTIDE LINKING C5 H12 As N O2 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.177
  • R-Value Work: 0.155
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.74 α = 90.00
b = 80.92 β = 90.00
c = 101.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-07-12
  • Released Date: 2014-03-19
  • Deposition author(s): Puhl, A.C., Aparicio, R., Polikarpov, I.

Revision History

  • 2014-04-16
    Type: Citation | Details: Citation update