4L9A

Crystal structure of Smu.1393c from cariogenic pathogen Streptococcus mutans

Structural Biology Knowledgebase: 4L9A SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.164

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4L9A

Classification: HYDROLASE

Total Structure Weight: 66976.33

Macromolecule Entities
Molecule Chains Length Organism Details
Putative uncharacterized protein Smu.1393c A, B 292 Streptococcus mutans Gene Name(s): SMU_1393c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.164
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 43.50 α = 90.00
b = 135.96 β = 92.51
c = 51.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-18
  • Released Date: 2013-07-17
  • Deposition author(s): Wang, Z., Li, L., Su, X.-D.
  • Previous versions: 3L80

Revision History

  • 2013-11-06
    Type: Citation | Details: Citation update