4KVF

The crystal structure of a rhamnose ABC transporter, periplasmic rhamnose-binding protein from Kribbella flavida DSM 17836

Structural Biology Knowledgebase: 4KVF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.72 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.178

Literature

Macromolecules
Sequence Display for 4KVF

Classification: TRANSPORT PROTEIN

Total Structure Weight: 35874.06

Macromolecule Entities
Molecule Chains Length Organism Details
Rhamnose ABC transporter, periplasmic rhamnose-binding protein A 342 Kribbella flavida Gene Name(s): Kfla_0259
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.72 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.178
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 71.27 α = 90.00
b = 78.45 β = 90.00
c = 49.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-22
  • Released Date: 2013-06-05
  • Deposition author(s): Tan, K., Hatzos-Skintges, C., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

No revisions since initial release