4KPG

Crystal structure of MycP1 from the ESX-1 type VII secretion system

Structural Biology Knowledgebase: 4KPG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.166

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KPG

Classification: HYDROLASE

Total Structure Weight: 42154.21

Macromolecule Entities
Molecule Chains Length Organism Details
Membrane-anchored mycosin mycp1 A 404 Mycobacterium smegmatis EC#: 3.4.21.62 IUBMB
Fragment: UNP residues 24-407
Gene Name(s): MSMEG_0083 MSMEI_0081
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.166
  • Space Group: I 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 81.00 α = 90.00
b = 94.08 β = 90.00
c = 119.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-13
  • Released Date: 2013-05-22
  • Deposition author(s): Solomonson, M., Wasney, G.A., Watanabe, N., Gruninger, R.J., Prehna, G., Strynadka, N.C.J.

Revision History

  • 2013-07-03
    Type: Citation | Details: Citation update
  • 2013-06-19
    Type: Citation | Details: Citation update