4KDL

Crystal structure of p97/VCP N in complex with OTU1 UBXL

Structural Biology Knowledgebase: 4KDL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.81 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.182

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KDL

Classification: SIGNALING PROTEIN / HYDROLASE

Total Structure Weight: 31500.20

Macromolecule Entities
Molecule Chains Length Organism Details
Transitional endoplasmic reticulum ATPase A 193 Homo sapiens EC#: 3.6.4.6 IUBMB
Fragment: N domain (Residues 23-196)
Gene Name(s): VCP Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Ubiquitin thioesterase OTU1 B 90 Saccharomyces cerevisiae EC#: 3.4.19.12 IUBMB
Fragment: UBX-like domain (Residues 1-73)
Gene Name(s): OTU1 YFL044C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.81 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.182
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 43.60 α = 90.00
b = 60.80 β = 90.00
c = 111.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-25
  • Released Date: 2014-03-19
  • Deposition author(s): Kim, S.J., Kim, E.E.

Revision History

  • 2014-05-21
    Type: Citation | Details: Citation update