4KA0

Crystal structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus (target NYSGRC-011676), space group P21221

Structural Biology Knowledgebase: 4KA0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 4KA0

Classification: OXIDOREDUCTASE

Total Structure Weight: 76263.13

Macromolecule Entities
Molecule Chains Length Organism Details
Putative thiol-disulfide oxidoreductase A, B, C, D 168 Bacteroides vulgatus Fragment: UNP residues 299-455
Gene Name(s): BVU_2222
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.205
  • Space Group: P 21 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 71.04 α = 90.00
b = 90.51 β = 90.00
c = 96.63 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-21
  • Released Date: 2013-05-22
  • Deposition author(s): Vetting, M.W., Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Gizzi, A., Garforth, S., Kar, A., Chan, M.K., Lafluer, J., Patel, H., Matikainen, B., Chamala, S., Lim, S., Celikgil, A., Villegas, G., Evans, B., Love, J., Fiser, A., Khafizov, K., Seidel, R.D., Bonanno, J.B., Armstrong, R.N., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)

Revision History

  • 2013-05-29
    Type: Data collection | Details: --