4K70

Crystal Structure of N-terminal half of Pseudorabiesvirus UL37 protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.173

Literature

Macromolecules
Sequence Display for 4K70

Classification: VIRAL PROTEIN

Total Structure Weight: 108288.22

Macromolecule Entities
Molecule Chains Length Organism Details
UL37 A, B 500 Suid alphaherpesvirus 1 Fragment: UNP residues 1-496
Gene Name(s): ul37 UL37
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.173
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 51.67 α = 90.00
b = 156.59 β = 91.33
c = 67.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-16
  • Released Date: 2014-03-19
  • Deposition author(s): Pitts, J.D., Heldwein, E.E.

Revision History

  • 2014-05-07
    Type: Database references