4JYO

Structural basis for angiopoietin-1 mediated signaling initiation


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 4JYO

Classification: SIGNALING PROTEIN

Total Structure Weight: 26353.78

Macromolecule Entities
Molecule Chains Length Organism Details
Angiopoietin-1 X 230 Homo sapiens Gene Name(s): ANGPT1 Gene View KIAA0003
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

X CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.186
  • Space Group: P 64 2 2

Unit Cell:

Length (Å) Angle (°)
a = 80.97 α = 90.00
b = 80.97 β = 90.00
c = 187.22 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-03-31
  • Released Date: 2013-05-08
  • Deposition author(s): Yu, X., Seegar, T.C.M., Dalton, A.C., Tzvetkova-Robev, D., Goldgur, Y., Nikolov, D.B., Barton, W.A.

Revision History

  • 2013-05-15
    Type: Database references