4JVA

Crystal Structure of RIIbeta(108-402) bound to HE33, a N6 di-propyl substituted cAMP analog

Structural Biology Knowledgebase: 4JVA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.238

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4JVA

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 34984.72

Macromolecule Entities
Molecule Chains Length Organism Details
cAMP-dependent protein kinase type II-beta regulatory subunit A 305 Rattus norvegicus Fragment: RIIbeta(108-402) of cAMP-dependent Protein Kinase
Gene Name(s): Prkar2b
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1OR
Query on 1OR

A (2R,4aR,6R,7R,7aS)-6-[6-(dipropylamino)-9H- purin-9-yl]tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine- 2,7-diol 2-oxide
C16 H24 N5 O6 P
QNRWJSITNIAJDB-XNIJJKJLSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.238
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 54.51 α = 90.00
b = 54.51 β = 90.00
c = 199.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-03-25
  • Released Date: 2013-09-18
  • Deposition author(s): Brown, S.H.J., Cheng, C.Y., Saldanha, A.S., Wu, J., Cottam, H., Sankaran, B., Taylor, S.S.

Revision History

  • 2013-10-30
    Type: Citation | Details: Citation update