4JIY

RNA three-way junction stabilized by a supramolecular di-iron(II) cylinder drug

Structural Biology Knowledgebase: 4JIY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.224

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4JIY

Classification: RNA

Total Structure Weight: 2867.51

Macromolecule Entities
Molecule Chains Length Organism Details
5'-(CGUACG)-3' A 6 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
NPM
Query on NPM

A N-[(1E)-PYRIDIN-2-YLMETHYLENE]-N-[4-(4-{[(1E)- PYRIDIN-2-YLMETHYLENE]AMINO}BENZYL)PHENYL]AMINE
1,1-BIS(N-(4-PHENYL)-2-PYRIDYLCARBOXALDIMINE)METHANE (Synonym)
C25 H20 N4
OMZVNZJNZUGOJK-UOSOPFLXSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.224
  • Space Group: P 21 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 45.74 α = 90.00
b = 45.74 β = 90.00
c = 45.74 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2013-03-07
  • Released Date: 2013-09-04
  • Deposition author(s): Sigel, R.K.O., Schnabl, J.A., Freisinger, E., Spingler, B., Hannon, M.J.

Revision History

  • 2013-11-06
    Type: Citation | Details: Citation update
  • 2013-10-02
    Type: Citation | Details: Citation update